"DAS" curves of the test set
These curves are obtained by pairwise comparison of the proteins in the
test set in "each against the rest" fashion. There are two cutoffs
indicated on the plots: a "strict" one at 2.2 DAS score, and a "loose" one
at 1.7. The hit at 2.2 is informative in terms of the number of matching
segments, while a hit at 1.7 gives the actual location of the
transmembrane segment. The segments reported in the "FT" records of the
SwissProt database are marked at 1.0 DAS score ("FT lines").
ALKB_PSEOL,
ATPL_ECOLI,
COX2_PARDE,
COX3_PARDE,
CX1B_PARDE,
CYDA_ECOLI,
CYDB_ECOLI,
CYOA_ECOLI,
CYOB_ECOLI,
CYOC_ECOLI,
CYOD_ECOLI,
CYOE_ECOLI,
DHG_ECOLI,
DMSC_ECOLI,
DSBB_ECOLI,
ENVZ_ECOLI,
EXBB_ECOLI,
EXBD_ECOLI,
FTSH_ECOLI,
FTSL_ECOLI,
FUCP_ECOLI,
GLPT_ECOLI,
HISM_SALTY,
HISQ_SALTY,
HOXN_ALCEU,
IMMA_CITFR,
KDPD_ECOLI,
KGTP_ECOLI,
LACY_ECOLI,
LSPA_ECOLI,
MALG_ECOLI,
MELB_ECOLI,
MOTA_ECOLI,
MOTB_ECOLI,
MTR_ECOLI,
OPPB_SALTY,
OPPC_SALTY,
PHOR_ECOLI,
RHAT_ECOLI,
SECD_ECOLI,
SECE_ECOLI,
SECY_ECOLI,
TOLQ_ECOLI,
TOLR_ECOLI
